Tools and resources

Xanthomonas oryzae pv. oryzae genome databasetree_backgorun2

We have sequenced new phylogenetic diverse Xoo strains. Whole genome sequencing was conducted using PacBio technology. Long reads and high coverage allowed us to obtain high quality assemblies. The first complete assembly of the African strain Xoo AXO1947 is deposited in the genbank NCBI-NIH.

Go to genbank to visualize and compare genomes.



Blast server for Xanthomonas oryzae pv. oryzae genomes and TAL effectorsSlide1

Sequenced strains have been fully anotated and their TAL effectors have been deposited in a database. Users can blast sequences to compare animoacid and nucleotide sequences in our database. Blast now